accession code emd Search Results


emd  (Thermo Fisher)
93
Thermo Fisher emd
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complex with remdesivir  (Gilead Sciences)
97
Gilead Sciences complex with remdesivir
Complex With Remdesivir, supplied by Gilead Sciences, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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accession codes emd 12331  (Thermo Fisher)
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Thermo Fisher accession codes emd 12331
a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the <t>LsaA-70S</t> complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.
Accession Codes Emd 12331, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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accession code emd 29699  (Thermo Fisher)
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Thermo Fisher accession code emd 29699
a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the <t>LsaA-70S</t> complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.
Accession Code Emd 29699, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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accession code emd 21859  (Thermo Fisher)
94
Thermo Fisher accession code emd 21859
a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the <t>LsaA-70S</t> complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.
Accession Code Emd 21859, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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accession codes emd 20522 emd 20523  (Thermo Fisher)
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Thermo Fisher accession codes emd 20522 emd 20523
a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the <t>LsaA-70S</t> complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.
Accession Codes Emd 20522 Emd 20523, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cryo em structures  (Thermo Fisher)
96
Thermo Fisher cryo em structures
a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the <t>LsaA-70S</t> complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.
Cryo Em Structures, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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accession codes emd 40659  (Cell Signaling Technology Inc)
93
Cell Signaling Technology Inc accession codes emd 40659
a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the <t>LsaA-70S</t> complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.
Accession Codes Emd 40659, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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accession codes emd 21672  (Thermo Fisher)
94
Thermo Fisher accession codes emd 21672
a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the <t>LsaA-70S</t> complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.
Accession Codes Emd 21672, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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accession codes emd 12939  (Thermo Fisher)
94
Thermo Fisher accession codes emd 12939
a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the <t>LsaA-70S</t> complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.
Accession Codes Emd 12939, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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emd-3571  (Databank Inc)
90
Databank Inc emd-3571
a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the <t>LsaA-70S</t> complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.
Emd 3571, supplied by Databank Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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accession codes emd 11031  (Thermo Fisher)
96
Thermo Fisher accession codes emd 11031
(a) Side views of the 3D maps of fibril structures A and B (left, gray) and corresponding molecular models (right, green/magenta). (b) Side view of longer segments of the two molecular models. (c, d) Cross-sectional views of the fibril protein conformations A (c) <t>(EMD-11031)</t> and B (d) (EMD-11030). Blue asterisk: region with blurry density surrounding the fibril core. Red asterisk: extra density decorating the fibril core, indicating an ordered peptide conformation. (e) Overlay of the molecular models of fibril structures A (PDB: 6Z10) and B (PDB: 6Z1I). The N- and C-terminal residues of the model are highlighted.
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Image Search Results


a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the LsaA-70S complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.

Journal: Nature Communications

Article Title: Structural basis of ABCF-mediated resistance to pleuromutilin, lincosamide, and streptogramin A antibiotics in Gram-positive pathogens

doi: 10.1038/s41467-021-23753-1

Figure Lengend Snippet: a – d Isolated density (grey mesh) with molecular models (sticks) for a initiator tRNA fMet (cyan), b interaction between AUG start codon of the mRNA (magenta) and anticodon of initiator tRNA fMet (cyan) in the P-site, c three G–C base pairs specific to the initiator tRNA fMet (cyan) and d helix formed between Shine-Dalgarno (SD) sequence of the mRNA (magenta) and anti-SD of the 16S rRNA (yellow). e Replicate tRNA microarray analysis of the LsaA-70S complex, illustrating the enrichment of initiator tRNA fMet in the LsaA-70S complex over the lysate. Confidence intervals between replicates were 92%.

Article Snippet: Cryo-EM maps have been deposited in the Electron Microscopy Data Bank (EMDB) with accession codes EMD-12331 (LsaA-70S), EMD-12332 (VgaA LC -70S), EMD-12333 ( S. aureus 70S with P-tRNA from VgaA LC immunoprecipitation) and EMD-12334 (VgaL-70S).

Techniques: Isolation, Sequencing, Microarray

(a) Side views of the 3D maps of fibril structures A and B (left, gray) and corresponding molecular models (right, green/magenta). (b) Side view of longer segments of the two molecular models. (c, d) Cross-sectional views of the fibril protein conformations A (c) (EMD-11031) and B (d) (EMD-11030). Blue asterisk: region with blurry density surrounding the fibril core. Red asterisk: extra density decorating the fibril core, indicating an ordered peptide conformation. (e) Overlay of the molecular models of fibril structures A (PDB: 6Z10) and B (PDB: 6Z1I). The N- and C-terminal residues of the model are highlighted.

Journal: bioRxiv

Article Title: Cryo-EM reveals structural breaks in a patient-derived amyloid fibril from systemic AL amyloidosis

doi: 10.1101/2020.10.12.332569

Figure Lengend Snippet: (a) Side views of the 3D maps of fibril structures A and B (left, gray) and corresponding molecular models (right, green/magenta). (b) Side view of longer segments of the two molecular models. (c, d) Cross-sectional views of the fibril protein conformations A (c) (EMD-11031) and B (d) (EMD-11030). Blue asterisk: region with blurry density surrounding the fibril core. Red asterisk: extra density decorating the fibril core, indicating an ordered peptide conformation. (e) Overlay of the molecular models of fibril structures A (PDB: 6Z10) and B (PDB: 6Z1I). The N- and C-terminal residues of the model are highlighted.

Article Snippet: The reconstructed cryo-EM maps were deposited in the Electron Microscopy Data Bank with accession codes EMD-11031 (structure A) and EMD-11030 (structure B).

Techniques: